Ostrovska S. S.

MICROBIOME OF THE ORAL CAVITY AND HUMAN HEALTH


About the author:

Ostrovska S. S.

Heading:

LITERATURE REVIEWS

Type of article:

Scentific article

Annotation:

The above review of the literature cites the results of the study on the microbiome of the human oral cavity. The term “microbiome” was proposed by D. Lederberg “to designate the ecological community of commensal, symbiotic and pathogenic microorganisms that simply permeate the surrounding space. Understanding of human health and diseases is impossible without full identification of the collective microbiome of the human body as a whole, including identification and description of the phylogeny of the most common oral taxons. It is recognized that caries, periodontitis, otitis as well as many systemic diseases are caused by symbiosis of organisms in the biofilm, and not by one pathogen. These data are consistent with the provisions of the project «Human Microbiome» which considers that it is necessary to identify all the basic organisms that make up the human microbiome and that there must be tools for this identification. Each human oral cavity has a unique bacterial diversity, on average consisting of about 150 bacterial taxons. Approximately 280 bacterial species of the oral cavity were identified by molecular methods, mainly using cloning studies based on 16S rRNA genes. It was shown that in each community of microorganisms there can be both competition and interconnection, therefore research on microbiome should include a deeper knowledge of the molecular mechanisms supporting its complex network of functions. The «language of interactions» host-microbiome must be identified quantitatively and, ultimately, characterized functionally. There have been identified numerous biosynthetic genes linked, inter alia, with human oral microbiome, which encode the main metabolic classes of peptide small molecules (PSM). The obtained results show the complex expression of PSM, whose role in human health and in the development of the disease is as yet unknown and is currently being intensively studied. Several PSMs such as mutanobactins, salivaricines and proteases that mediate antagonistic interactions between bacteria in the oral cavity are isolated and structurally identified. However, the mechanisms that initiate the biosynthesis of these PSMs in the complex host-microbiome in vivo interactions are unknown yet and are currently being intensively studied

Tags:

oral microbiome, molecular studies

Bibliography:

  • Lederberg JA, Mccray T. ‘Ome sweet’ omics – a genealogical treasury of words. Scientst. 2001;15(7):8-10.
  • Dewhirst FE, Chen T, Izard J, Paster BJ, Tanner AC, Yu WH, et al. The human oral microbiome. Journal of Bacteriol. 2010;192(19):5002-17.
  • Joshipura KJ, Rimm E, Douglass CW, Trichopoulos D, Ascherio A, Willet WC. Poor oral health and coronary heart disease. Journal of DentRes. 1996;75:1631-36.
  • Joshipura KJ, Hung HC, Rimm EB, Willet WC, Ascherio A. Periodontal disease, tooth loss, and incidence of ischemic stroke. Stroke.2003;34:47-52.
  • Offenbacher S, Jared HL, O’Reilly PG, Wells SR, Salvi GE, Lawrence HP, et al. Potental pathogenic mechanisms of periodontts associatedpregnancy complicatons. Ann Periodontol. 1998;3(1):233-50.
  • Genco RJ, Grossi SG, Ho A, Nishimura F, Murayama Y. A proposed model linking inflammaton to obesity, diabetes, and periodontal infectons. Journal of Periodontol. 2005;76(11):2075-84.
  • Awano S, Ansai T, Takata Y, Soh I, Akifusa S, Hamasaki T, et al. Oral health and mortality risk from pneumonia in the elderly. Journal of DentRes. 2008;87:334-9.
  • Cho I, Blaser MJ. The human microbiome: at the interface of health and disease. Nat Rev Genet. 2012;13(4):260-70.
  • Round JL, Mazmanian SK. The gut microbiota shapes intestnal immune responses during health and disease. Nat Rev Immunol.2009;9(5):313-23.
  • Mark Welch JL, Rosset BJ, Rieken CW, Dewhirst FE, Borisy GG. Biogeography of a human oral microbiome at the micron scale. Proc NatlAcad Sci USA. 2016;113(6):791-800.
  • Aas JA, Dardis SR, Griffen AL, Stokes LN, Lee AM, Olsen I, et al. Defning the normal bacterial flora of the oral cavity. Journal of Clin Microbiol.2005;43(11):5721-32.
  • Uter DR, Mark JL, Welch GG. Borisy Individuality, stability and variability of the plaque microbiome. Front Microbiol. 2016;7:564-70.
  • Paster BJ, Boches SK, Galvin JL, Ericson RE, Lau CN, Levanos VA, et al. Bacterial diversity in human subgingival plaque. Journal of Bacteriol.2001;183(12):3770-83.
  • Mager DL, Ximenez-Fyvie LA, Haffajee AD, Socransky SS. Distributon of selected bacterial species on intraoral surfaces. Journal of Clin Periodontol. 2003;30(7):644-54.
  • He X, McLean JS, Edlund A, Yooseph S, Hall AP, Liu SY, et al. Cultvaton of a human-associated TM7 phylotype reveals a reduced genome andepibiotc parasitc lifestyle. Proc Natl Acad Sci USA. 2015;112(1):244-9.
  • Kuramitsu HK, He X, Lux R, Anderson MH, Shi W. Interspecies interactons within oral microbial communites. Microbiol Mol Biol Rev.2007;71(4):653-70.
  • Hall-Stoodley L, Costerton JW, Stoodley P. Bacterial bioflms: from the natural environment to infectous diseases. Nat Rev Microbiol.2004;2(2):95-108.
  • Jenkinson HF, Lamont RJ. Oral microbial communites in sickness and in health trends. Microbiol. 2005;13(12):589-95.
  • Peterson J, Garges S, Giovanni M, McInnes P, Wang L, Schloss JA, et al. The NIH Human Microbiome Project. Genome Res. 2009;19:2317-23.
  • Turnbaugh PJ, Ley RE, Hamady M, Fraser-Ligget CM, Knight R, Gordon JI. The human microbiome project. Nature. 2007;449(7164):804-10.
  • Donia MS, Fischbach MA. Human microbiota. Small molecules from the human microbiota. Science. 2015;349(6246):1254766.
  • Garg N, Luzzato-Knaan T, Melnik AV, Caraballo-Rodríguez AM, Floros DJ, Petras D, et al. Natural products as mediators of disease. Nat ProdRep. 2017;34(11):194-219.
  • Joyner PM, Liu J, Zhang Z, Merrit J, Qi F, Cichewicz RH. Mutanobactn A from the human oral pathogen Streptococcus mutans is a crosskingdom regulator of the yeast-mycelium transiton. Org Biomol Chem. 2010;8(24):5486-9.
  • Hyink O, Wescombe PA, Upton M, Ragland N, Burton JP, Tagg JR. Salivaricin A2 and the novel lantbiotc salivaricin B are encoded at adjacent loci on a 190-kilobase transmissible megaplasmid in the oral probiotc strain Streptococcus salivarius K-12. Appl Environ Microbiol.2007;73:1107-13.
  • Takahashi N, Schachtele CF. Effect of pH on the growth and proteolytc actvity of Porphyromonas gingivalis and Bacteroides. Journal of DentRes. 1990;69(6):1266-9.
  • Edlund A, Yang Y, Hall AP, Guo L, Lux R, He X, et al. An in vitro bioflm model system maintaining a highly reproducible species and metabolicdiversity approaching that of the human oral microbiome. Microbiome. 2013;1(1):25-30.
  • Edlund A, Yang Y, Yooseph S, Hall AP, Nguyen DD, Dorrestein PC, et al. Meta-omics uncover temporal regulaton of pathways across oralmicrobiome genera during in vitro sugar metabolism. ISME Journal. 2015;9:2605-19.
  • Camilli A, Bassler BL. Bacterial small-molecule signaling pathways. Science. 2006;311(5764):1113-6.
  • Edlund A, Garg N, Mohimani H, Gurevich A, He X, Shi W, et al. Metabolic Fingerprints from the Human Oral Microbiome Reveal a Vast Knowledge Gap of Secreted Small Peptdic. Molecules. mSystems. 2017;2(4):e00058-17.

Publication of the article:

«Bulletin of problems biology and medicine» Issue 1 Part 2 (143), 2018 year, 35-38 pages, index UDK 612.31:616-008.87-93:613.9

DOI: